IL_6XZ7_050

3D structure

PDB id

6XZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

6XZ7|1|A|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6XZ7_050 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.0877

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

6XZ7|1|A|C|1417
6XZ7|1|A|G|1418
6XZ7|1|A|A|1419
6XZ7|1|A|A|1420
6XZ7|1|A|G|1421
*
6XZ7|1|A|C|1577
6XZ7|1|A|U|1578
6XZ7|1|A|A|1579
6XZ7|1|A|A|1580
6XZ7|1|A|G|1581

Current chains

Chain A

23S rRNA

Nearby chains