IL_6XZB_013

3D structure

PDB id

6XZB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GGACC*GGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6XZB_013 not in the Motif Atlas

Homologous match to IL_5J7L_013

Geometric discrepancy: 0.5133

The information below is about IL_5J7L_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_66997.2

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

2

Unit IDs

6XZB|1|A1|G|203
6XZB|1|A1|G|204
6XZB|1|A1|A|205
6XZB|1|A1|C|206
6XZB|1|A1|C|207
*
6XZB|1|A1|G|212
6XZB|1|A1|G|213
6XZB|1|A1|C|214

Current chains

Chain A1

16S rRNA

Nearby chains