IL_6XZB_067
3D structure
- PDB id
- 6XZB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- GC*GAC
- Length
- 5 nucleotides
- Bulged bases
- 6XZB|1|A2|A|443
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6XZB_067 not in the Motif Atlas
- Homologous match to IL_7RQB_002
- Geometric discrepancy: 0.0634
- The information below is about IL_7RQB_002
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 118
Unit IDs
6XZB|1|A2|G|36
6XZB|1|A2|C|37
*
6XZB|1|A2|G|442
6XZB|1|A2|A|443
6XZB|1|A2|C|444
Current chains
- Chain A2
- 23S rRNA
Nearby chains
- Chain E2
- 50S ribosomal protein L4
- Chain Q2
- 50S ribosomal protein L20
Coloring options: