3D structure

PDB id
6XZB (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).
Experimental method
ELECTRON MICROSCOPY
Resolution
2.54 Å

Loop

Sequence
GAAGUUUUCA*UGAGAAUGUGCCUUCGGGAAC
Length
31 nucleotides
Bulged bases
6XZB|1|A1|U|1025, 6XZB|1|A1|U|1030
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6XZB|1|A1|G|1003
6XZB|1|A1|A|1004
6XZB|1|A1|A|1005
6XZB|1|A1|G|1006
6XZB|1|A1|U|1007
6XZB|1|A1|U|1008
6XZB|1|A1|U|1009
6XZB|1|A1|U|1010
6XZB|1|A1|C|1011
6XZB|1|A1|A|1012
*
6XZB|1|A1|U|1017
6XZB|1|A1|G|1018
6XZB|1|A1|A|1019
6XZB|1|A1|G|1020
6XZB|1|A1|A|1021
6XZB|1|A1|A|1022
6XZB|1|A1|U|1023
6XZB|1|A1|G|1024
6XZB|1|A1|U|1025
6XZB|1|A1|G|1026
6XZB|1|A1|C|1027
6XZB|1|A1|C|1028
6XZB|1|A1|U|1029
6XZB|1|A1|U|1030
6XZB|1|A1|C|1031
6XZB|1|A1|G|1032
6XZB|1|A1|G|1033
6XZB|1|A1|G|1034
6XZB|1|A1|A|1035
6XZB|1|A1|A|1036
6XZB|1|A1|C|1037

Current chains

Chain A1
16S rRNA

Nearby chains

Chain N1
30S ribosomal protein S14
Chain S1
30S ribosomal protein S19

Coloring options:

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