IL_6Y0G_011

3D structure

PDB id

6Y0G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in classical-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCGCCGCUCGUGG*CGGCGCGCC

Length

22 nucleotides

Bulged bases

6Y0G|1|L5|G|188

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y0G|1|L5|G|177
6Y0G|1|L5|C|178
6Y0G|1|L5|G|179
6Y0G|1|L5|C|180
6Y0G|1|L5|C|181
6Y0G|1|L5|G|182
6Y0G|1|L5|C|183
6Y0G|1|L5|U|184
6Y0G|1|L5|C|185
6Y0G|1|L5|G|186
6Y0G|1|L5|U|187
6Y0G|1|L5|G|188
6Y0G|1|L5|G|189
*
6Y0G|1|L5|C|252
6Y0G|1|L5|G|253
6Y0G|1|L5|G|254
6Y0G|1|L5|C|255
6Y0G|1|L5|G|256
6Y0G|1|L5|C|257
6Y0G|1|L5|G|258
6Y0G|1|L5|C|259
6Y0G|1|L5|C|260

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain L8

5.8S ribosomal RNA; 5.8S rRNA

Chain LL

60S ribosomal protein L13

Chain Lh

60S ribosomal protein L35

Chain Lj

60S ribosomal protein L37