IL_6Y0G_032

3D structure

PDB id

6Y0G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in classical-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

6Y0G|1|L5|A|932, 6Y0G|1|L5|C|934, 6Y0G|1|L5|A|935, 6Y0G|1|L5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y0G|1|L5|A|732
6Y0G|1|L5|A|733
6Y0G|1|L5|G|734
6Y0G|1|L5|G|735
*
6Y0G|1|L5|C|928
6Y0G|1|L5|A|929
6Y0G|1|L5|G|930
6Y0G|1|L5|C|931
6Y0G|1|L5|A|932
6Y0G|1|L5|G|933
6Y0G|1|L5|C|934
6Y0G|1|L5|A|935
6Y0G|1|L5|C|936
6Y0G|1|L5|U|937

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a