IL_6Y0G_059

3D structure

PDB id

6Y0G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in classical-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUCGCAGACCCGACCCGCCACG*CG

Length

24 nucleotides

Bulged bases

6Y0G|1|L5|C|1707, 6Y0G|1|L5|C|1714

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y0G|1|L5|C|1694
6Y0G|1|L5|U|1695
6Y0G|1|L5|C|1696
6Y0G|1|L5|G|1697
6Y0G|1|L5|C|1698
6Y0G|1|L5|A|1699
6Y0G|1|L5|G|1700
6Y0G|1|L5|A|1701
6Y0G|1|L5|C|1702
6Y0G|1|L5|C|1703
6Y0G|1|L5|C|1704
6Y0G|1|L5|G|1705
6Y0G|1|L5|A|1706
6Y0G|1|L5|C|1707
6Y0G|1|L5|C|1714
6Y0G|1|L5|C|1715
6Y0G|1|L5|G|1716
6Y0G|1|L5|C|1717
6Y0G|1|L5|C|1718
6Y0G|1|L5|A|1719
6Y0G|1|L5|C|1720
6Y0G|1|L5|G|1721
*
6Y0G|1|L5|C|1841
6Y0G|1|L5|G|1842

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain LT

60S ribosomal protein L21

Chain Lb

60S ribosomal protein L29