IL_6Y0G_179

3D structure

PDB id

6Y0G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in classical-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GACUU*AUGCCGAC

Length

13 nucleotides

Bulged bases

6Y0G|1|S2|C|142

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y0G|1|S2|G|130
6Y0G|1|S2|A|141
6Y0G|1|S2|C|142
6Y0G|1|S2|U|143
6Y0G|1|S2|U|144
*
6Y0G|1|S2|A|175
6Y0G|1|S2|U|176
6Y0G|1|S2|G|177
6Y0G|1|S2|C|178
6Y0G|1|S2|C|179
6Y0G|1|S2|G|180
6Y0G|1|S2|A|181
6Y0G|1|S2|C|182

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain LW

60S ribosomal protein L24

Chain SG

40S ribosomal protein S6