IL_6Y0G_192

3D structure

PDB id

6Y0G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in classical-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCACUCC*GGGAG

Length

12 nucleotides

Bulged bases

6Y0G|1|S2|G|507

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y0G|1|S2|C|491
6Y0G|1|S2|C|492
6Y0G|1|S2|A|493
6Y0G|1|S2|C|494
6Y0G|1|S2|U|495
6Y0G|1|S2|C|496
6Y0G|1|S2|C|497
*
6Y0G|1|S2|G|505
6Y0G|1|S2|G|506
6Y0G|1|S2|G|507
6Y0G|1|S2|A|508
6Y0G|1|S2|G|509

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

40S ribosomal protein S4, X isoform

Chain SJ

40S ribosomal protein S9

Chain SY

40S ribosomal protein S24