IL_6Y0G_193

3D structure

PDB id

6Y0G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in classical-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AAUACAG*CCUGUAAUU

Length

16 nucleotides

Bulged bases

6Y0G|1|S2|U|556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y0G|1|S2|A|528
6Y0G|1|S2|A|529
6Y0G|1|S2|U|530
6Y0G|1|S2|A|531
6Y0G|1|S2|C|532
6Y0G|1|S2|A|533
6Y0G|1|S2|G|534
*
6Y0G|1|S2|C|549
6Y0G|1|S2|C|550
6Y0G|1|S2|U|551
6Y0G|1|S2|G|552
6Y0G|1|S2|U|553
6Y0G|1|S2|A|554
6Y0G|1|S2|A|555
6Y0G|1|S2|U|556
6Y0G|1|S2|U|557

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain Se

40S ribosomal protein S30