3D structure

PDB id
6Y0G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of human ribosome in classical-PRE state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UUGAAAAAAUU*ACCGCAGCUA
Length
21 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6Y0G|1|S2|U|805
6Y0G|1|S2|U|806
6Y0G|1|S2|G|807
6Y0G|1|S2|A|808
6Y0G|1|S2|A|809
6Y0G|1|S2|A|810
6Y0G|1|S2|A|811
6Y0G|1|S2|A|812
6Y0G|1|S2|A|813
6Y0G|1|S2|U|814
6Y0G|1|S2|U|815
*
6Y0G|1|S2|A|849
6Y0G|1|S2|C|850
6Y0G|1|S2|C|851
6Y0G|1|S2|G|852
6Y0G|1|S2|C|853
6Y0G|1|S2|A|854
6Y0G|1|S2|G|855
6Y0G|1|S2|C|856
6Y0G|1|S2|U|857
6Y0G|1|S2|A|858

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SE
40S ribosomal protein S4, X isoform
Chain SJ
40S ribosomal protein S9
Chain SL
40S ribosomal protein S11
Chain SW
40S ribosomal protein S15a

Coloring options:

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