IL_6Y0G_270
3D structure
- PDB id
- 6Y0G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome in classical-PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUAC*GUCCCCCAA
- Length
- 13 nucleotides
- Bulged bases
- 6Y0G|1|S2|C|1433, 6Y0G|1|S2|C|1434, 6Y0G|1|S2|C|1435, 6Y0G|1|S2|C|1436, 6Y0G|1|S2|C|1437
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Y0G_270 not in the Motif Atlas
- Homologous match to IL_8P9A_446
- Geometric discrepancy: 0.4892
- The information below is about IL_8P9A_446
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Y0G|1|S2|U|1407
6Y0G|1|S2|U|1408
6Y0G|1|S2|A|1409
6Y0G|1|S2|C|1410
*
6Y0G|1|S2|G|1431
6Y0G|1|S2|U|1432
6Y0G|1|S2|C|1433
6Y0G|1|S2|C|1434
6Y0G|1|S2|C|1435
6Y0G|1|S2|C|1436
6Y0G|1|S2|C|1437
6Y0G|1|S2|A|1438
6Y0G|1|S2|A|1439
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SQ
- 40S ribosomal protein S16
- Chain SU
- 40S ribosomal protein S20
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