IL_6Y2L_151

3D structure

PDB id

6Y2L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in POST state

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGCG*CCC

Length

7 nucleotides

Bulged bases

6Y2L|1|L5|C|4900

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6Y2L_151 not in the Motif Atlas

Geometric match to IL_7RQB_045

Geometric discrepancy: 0.3148

The information below is about IL_7RQB_045

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_52767.4

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

6Y2L|1|L5|G|4898
6Y2L|1|L5|G|4899
6Y2L|1|L5|C|4900
6Y2L|1|L5|G|4901
*
6Y2L|1|L5|C|4920
6Y2L|1|L5|C|4921
6Y2L|1|L5|C|4922

Current chains

Chain L5

28S ribosomal RNA

Nearby chains