3D structure

PDB id
6Y2L (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of human ribosome in POST state
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GGACAGGAUUGACAGA*UCUUUCUCGAUUCC
Length
30 nucleotides
Bulged bases
6Y2L|1|S2|G|1285
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6Y2L|1|S2|G|1280
6Y2L|1|S2|G|1281
6Y2L|1|S2|A|1282
6Y2L|1|S2|C|1283
6Y2L|1|S2|A|1284
6Y2L|1|S2|G|1285
6Y2L|1|S2|G|1286
6Y2L|1|S2|A|1287
6Y2L|1|S2|U|1288
6Y2L|1|S2|U|1289
6Y2L|1|S2|G|1290
6Y2L|1|S2|A|1291
6Y2L|1|S2|C|1292
6Y2L|1|S2|A|1293
6Y2L|1|S2|G|1294
6Y2L|1|S2|A|1295
*
6Y2L|1|S2|U|1304
6Y2L|1|S2|C|1305
6Y2L|1|S2|U|1306
6Y2L|1|S2|U|1307
6Y2L|1|S2|U|1308
6Y2L|1|S2|C|1309
6Y2L|1|S2|U|1310
6Y2L|1|S2|C|1311
6Y2L|1|S2|G|1312
6Y2L|1|S2|A|1313
6Y2L|1|S2|U|1314
6Y2L|1|S2|U|1315
6Y2L|1|S2|C|1316
6Y2L|1|S2|C|1317

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SK
40S ribosomal protein S10
Chain SP
40S ribosomal protein S15
Chain Sd
40S ribosomal protein S29

Coloring options:

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