IL_6Y57_024

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGUCGGCGGCCCGG*UCCCCCGACC

Length

25 nucleotides

Bulged bases

6Y57|1|L5|C|501, 6Y57|1|L5|C|502, 6Y57|1|L5|C|503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|L5|G|491
6Y57|1|L5|U|492
6Y57|1|L5|G|493
6Y57|1|L5|U|494
6Y57|1|L5|C|495
6Y57|1|L5|G|496
6Y57|1|L5|G|497
6Y57|1|L5|C|498
6Y57|1|L5|G|499
6Y57|1|L5|G|500
6Y57|1|L5|C|501
6Y57|1|L5|C|502
6Y57|1|L5|C|503
6Y57|1|L5|G|504
6Y57|1|L5|G|505
*
6Y57|1|L5|U|653
6Y57|1|L5|C|654
6Y57|1|L5|C|655
6Y57|1|L5|C|656
6Y57|1|L5|C|657
6Y57|1|L5|C|658
6Y57|1|L5|G|659
6Y57|1|L5|A|660
6Y57|1|L5|C|661
6Y57|1|L5|C|662

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LQ

60S ribosomal protein L18