IL_6Y57_029

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

6Y57|1|L5|A|932, 6Y57|1|L5|C|934, 6Y57|1|L5|A|935, 6Y57|1|L5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|L5|A|732
6Y57|1|L5|A|733
6Y57|1|L5|G|734
6Y57|1|L5|G|735
*
6Y57|1|L5|C|928
6Y57|1|L5|A|929
6Y57|1|L5|G|930
6Y57|1|L5|C|931
6Y57|1|L5|A|932
6Y57|1|L5|G|933
6Y57|1|L5|C|934
6Y57|1|L5|A|935
6Y57|1|L5|C|936
6Y57|1|L5|U|937

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a