IL_6Y57_154

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCAGAG*CGAUC

Length

11 nucleotides

Bulged bases

6Y57|1|L5|C|5013

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|L5|G|5012
6Y57|1|L5|C|5013
6Y57|1|L5|A|5014
6Y57|1|L5|G|5015
6Y57|1|L5|A|5016
6Y57|1|L5|G|5017
*
6Y57|1|L5|C|5032
6Y57|1|L5|G|5033
6Y57|1|L5|A|5034
6Y57|1|L5|U|5035
6Y57|1|L5|C|5036

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LR

60S ribosomal protein L19

Chain LW

60S ribosomal protein L24

Chain SI

40S ribosomal protein S8