IL_6Y57_191

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AAUACAGG*CCCUGUAAUU

Length

18 nucleotides

Bulged bases

6Y57|1|S2|U|556

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|S2|A|528
6Y57|1|S2|A|529
6Y57|1|S2|U|530
6Y57|1|S2|A|531
6Y57|1|S2|C|532
6Y57|1|S2|A|533
6Y57|1|S2|G|534
6Y57|1|S2|G|535
*
6Y57|1|S2|C|548
6Y57|1|S2|C|549
6Y57|1|S2|C|550
6Y57|1|S2|U|551
6Y57|1|S2|G|552
6Y57|1|S2|U|553
6Y57|1|S2|A|554
6Y57|1|S2|A|555
6Y57|1|S2|U|556
6Y57|1|S2|U|557

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain Se

40S ribosomal protein S30