IL_6Y57_228
3D structure
- PDB id
- 6Y57 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome in hybrid-PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- ACUAG*CUUCU
- Length
- 10 nucleotides
- Bulged bases
- 6Y57|1|S2|C|1403, 6Y57|1|S2|U|1404
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Y57_228 not in the Motif Atlas
- Homologous match to IL_8CRE_459
- Geometric discrepancy: 0.2513
- The information below is about IL_8CRE_459
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Y57|1|S2|A|1402
6Y57|1|S2|C|1403
6Y57|1|S2|U|1404
6Y57|1|S2|A|1405
6Y57|1|S2|G|1406
*
6Y57|1|S2|C|1440
6Y57|1|S2|U|1441
6Y57|1|S2|U|1442
6Y57|1|S2|C|1443
6Y57|1|S2|U|1444
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SQ
- 40S ribosomal protein S16
- Chain SU
- 40S ribosomal protein S20
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