IL_6Y57_232

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

6Y57|1|S2|A|1580

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|S2|G|1550
6Y57|1|S2|U|1551
6Y57|1|S2|G|1552
6Y57|1|S2|C|1553
6Y57|1|S2|C|1554
6Y57|1|S2|U|1555
6Y57|1|S2|A|1556
6Y57|1|S2|C|1557
6Y57|1|S2|C|1558
*
6Y57|1|S2|G|1577
6Y57|1|S2|U|1578
6Y57|1|S2|A|1579
6Y57|1|S2|A|1580
6Y57|1|S2|C|1581
6Y57|1|S2|C|1582

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SD

40S ribosomal protein S3

Chain SK

40S ribosomal protein S10

Chain ST

40S ribosomal protein S19

Chain SU

40S ribosomal protein S20

Chain Sd

40S ribosomal protein S29