IL_6Y57_248
3D structure
- PDB id
- 6Y57 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human ribosome in hybrid-PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGAUAG*CAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCC
- Length
- 50 nucleotides
- Bulged bases
- 6Y57|1|D4|U|8, 6Y57|1|D4|U|47, 6Y57|1|D4|U|60
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Y57|1|D4|G|5
6Y57|1|D4|G|6
6Y57|1|D4|A|7
6Y57|1|D4|U|8
6Y57|1|D4|A|9
6Y57|1|D4|G|10
*
6Y57|1|D4|C|25
6Y57|1|D4|A|26
6Y57|1|D4|G|27
6Y57|1|D4|G|28
6Y57|1|D4|G|29
6Y57|1|D4|G|30
6Y57|1|D4|A|31
6Y57|1|D4|U|32
6Y57|1|D4|U|33
6Y57|1|D4|G|34
6Y57|1|D4|A|35
6Y57|1|D4|A|36
6Y57|1|D4|A|37
6Y57|1|D4|A|38
6Y57|1|D4|U|39
6Y57|1|D4|C|40
6Y57|1|D4|C|41
6Y57|1|D4|C|42
6Y57|1|D4|C|43
6Y57|1|D4|G|44
6Y57|1|D4|U|45
6Y57|1|D4|G|46
6Y57|1|D4|U|47
6Y57|1|D4|C|48
6Y57|1|D4|C|49
6Y57|1|D4|U|50
6Y57|1|D4|U|51
6Y57|1|D4|G|52
6Y57|1|D4|G|53
6Y57|1|D4|U|54
6Y57|1|D4|U|55
6Y57|1|D4|C|56
6Y57|1|D4|G|57
6Y57|1|D4|A|58
6Y57|1|D4|U|59
6Y57|1|D4|U|60
6Y57|1|D4|C|61
6Y57|1|D4|C|62
6Y57|1|D4|G|63
6Y57|1|D4|A|64
6Y57|1|D4|G|65
6Y57|1|D4|U|66
6Y57|1|D4|C|67
6Y57|1|D4|C|68
Current chains
- Chain D4
- A/P tRNA
Nearby chains
- Chain A4
- mRNA
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LI
- 60S ribosomal protein L10-like
- Chain LJ
- 60S ribosomal protein L11
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SP
- 40S ribosomal protein S15
- Chain Se
- 40S ribosomal protein S30
Coloring options: