IL_6Y57_256

3D structure

PDB id

6Y57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of human ribosome in hybrid-PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGGGUC*GGCGCCUAGCA

Length

17 nucleotides

Bulged bases

6Y57|1|L5|C|3593, 6Y57|1|L5|A|3596

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y57|1|L5|U|2900
6Y57|1|L5|G|2901
6Y57|1|L5|G|2902
6Y57|1|L5|G|2903
6Y57|1|L5|U|2904
6Y57|1|L5|C|2905
*
6Y57|1|L5|G|3589
6Y57|1|L5|G|3590
6Y57|1|L5|C|3591
6Y57|1|L5|G|3592
6Y57|1|L5|C|3593
6Y57|1|L5|C|3594
6Y57|1|L5|U|3595
6Y57|1|L5|A|3596
6Y57|1|L5|G|3597
6Y57|1|L5|C|3598
6Y57|1|L5|A|3599

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LR

60S ribosomal protein L19