IL_6Y6X_021
3D structure
- PDB id
- 6Y6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Tetracenomycin X bound to the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- 6Y6X|1|L5|C|696
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Y6X_021 not in the Motif Atlas
- Geometric match to IL_3W3S_001
- Geometric discrepancy: 0.333
- The information below is about IL_3W3S_001
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_61258.15
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 41
Unit IDs
6Y6X|1|L5|C|459
6Y6X|1|L5|C|460
*
6Y6X|1|L5|G|695
6Y6X|1|L5|C|696
6Y6X|1|L5|G|697
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LE
- 60S ribosomal protein L6
- Chain Lr
- 60S ribosomal protein L28
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