IL_6Y6X_033
3D structure
- PDB id
- 6Y6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Tetracenomycin X bound to the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AC*GAAU
- Length
- 6 nucleotides
- Bulged bases
- 6Y6X|1|L5|A|943, 6Y6X|1|L5|A|944
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Y6X_033 not in the Motif Atlas
- Geometric match to IL_7V9E_001
- Geometric discrepancy: 0.2722
- The information below is about IL_7V9E_001
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
6Y6X|1|L5|A|723
6Y6X|1|L5|C|724
*
6Y6X|1|L5|G|942
6Y6X|1|L5|A|943
6Y6X|1|L5|A|944
6Y6X|1|L5|U|945
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4
- Chain LF
- 60S ribosomal protein L7
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