IL_6Y6X_039

3D structure

PDB id

6Y6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tetracenomycin X bound to the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUCCCGG*CGGG

Length

11 nucleotides

Bulged bases

6Y6X|1|L5|G|1051

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y6X|1|L5|C|988
6Y6X|1|L5|U|989
6Y6X|1|L5|C|990
6Y6X|1|L5|C|991
6Y6X|1|L5|C|992
6Y6X|1|L5|G|993
6Y6X|1|L5|G|994
*
6Y6X|1|L5|C|1050
6Y6X|1|L5|G|1051
6Y6X|1|L5|G|1064
6Y6X|1|L5|G|1065

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LE

60S ribosomal protein L6