IL_6Y6X_046
3D structure
- PDB id
- 6Y6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Tetracenomycin X bound to the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CU*GGG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Y6X_046 not in the Motif Atlas
- Geometric match to IL_4WF9_007
- Geometric discrepancy: 0.2897
- The information below is about IL_4WF9_007
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_15011.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 48
Unit IDs
6Y6X|1|L5|C|1099
6Y6X|1|L5|U|1100
*
6Y6X|1|L5|G|1194
6Y6X|1|L5|G|1195
6Y6X|1|L5|G|1196
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: