IL_6Y6X_182

3D structure

PDB id

6Y6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tetracenomycin X bound to the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCUCCC*GGCCC

Length

11 nucleotides

Bulged bases

6Y6X|1|L5|C|172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Y6X|1|L5|G|169
6Y6X|1|L5|C|170
6Y6X|1|L5|U|171
6Y6X|1|L5|C|172
6Y6X|1|L5|C|173
6Y6X|1|L5|C|174
*
6Y6X|1|L5|G|262
6Y6X|1|L5|G|263
6Y6X|1|L5|C|264
6Y6X|1|L5|C|265
6Y6X|1|L5|C|266

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LL

60S ribosomal protein L13

Chain Lh

60S ribosomal protein L35