IL_6YAL_037

3D structure

PDB id

6YAL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 48S late-stage initiation complex with beta-globin mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUCUCGG*CGAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YAL|1|2|C|741
6YAL|1|2|C|742
6YAL|1|2|U|743
6YAL|1|2|C|744
6YAL|1|2|U|745
6YAL|1|2|C|746
6YAL|1|2|G|747
6YAL|1|2|G|748
*
6YAL|1|2|C|788
6YAL|1|2|G|789
6YAL|1|2|A|790
6YAL|1|2|A|791
6YAL|1|2|G|792

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein eS4

Chain I

40S ribosomal protein eS6

Chain J

40S ribosomal protein eS7

Chain N

40S ribosomal protein uS17