IL_6YAL_087
3D structure
- PDB id
- 6YAL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 48S late-stage initiation complex with beta-globin mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGCUAC*GUAAAAG
- Length
- 13 nucleotides
- Bulged bases
- 6YAL|1|2|A|1819
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YAL|1|2|C|1703
6YAL|1|2|G|1704
6YAL|1|2|C|1705
6YAL|1|2|U|1706
6YAL|1|2|A|1707
6YAL|1|2|C|1708
*
6YAL|1|2|G|1814
6YAL|1|2|U|1815
6YAL|1|2|A|1816
6YAL|1|2|A|1817
6YAL|1|2|A|1818
6YAL|1|2|A|1819
6YAL|1|2|G|1820
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 3
- beta-globin mRNA
- Chain R
- 40S ribosomal protein uS19
- Chain Z
- 40S ribosomal protein uS12
- Chain j
- eukaryotic translation initiation factor 1A
- Chain k
- ATP-binding cassette sub-family E member 1 (ABCE1)
- Chain l
- 60s ribosomal protein ul41
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