IL_6YAN_037

3D structure

PDB id

6YAN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 48S late-stage translation initiation complex with histone 4 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.48 Å

Loop

Sequence

CCUCUCGG*CGAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YAN|1|2|C|741
6YAN|1|2|C|742
6YAN|1|2|U|743
6YAN|1|2|C|744
6YAN|1|2|U|745
6YAN|1|2|C|746
6YAN|1|2|G|747
6YAN|1|2|G|748
*
6YAN|1|2|C|788
6YAN|1|2|G|789
6YAN|1|2|A|790
6YAN|1|2|A|791
6YAN|1|2|G|792

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S4

Chain I

40S ribosomal protein S6

Chain J

ribosomal protein eS7

Chain N

Ribosomal protein S11