IL_6YAN_041

3D structure

PDB id

6YAN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian 48S late-stage translation initiation complex with histone 4 mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.48 Å

Loop

Sequence

GAAAAAAUUA*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YAN|1|2|G|803
6YAN|1|2|A|804
6YAN|1|2|A|805
6YAN|1|2|A|806
6YAN|1|2|A|807
6YAN|1|2|A|808
6YAN|1|2|A|809
6YAN|1|2|U|810
6YAN|1|2|U|811
6YAN|1|2|A|812
*
6YAN|1|2|U|844
6YAN|1|2|A|845
6YAN|1|2|C|846
6YAN|1|2|C|847
6YAN|1|2|G|848
6YAN|1|2|C|849
6YAN|1|2|A|850
6YAN|1|2|G|851
6YAN|1|2|C|852

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S4

Chain L

Ribosomal protein S9 (Predicted)

Chain N

Ribosomal protein S11

Chain Y

Ribosomal protein S15a