IL_6YBW_012

3D structure

PDB id

6YBW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a human 48S translational initiation complex - 40S body

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

U(OMU)CC(PSU)U(OMU)G*CAUUCGA

Length

15 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YBW|1|A|U|115
6YBW|1|A|OMU|116
6YBW|1|A|C|117
6YBW|1|A|C|118
6YBW|1|A|PSU|119
6YBW|1|A|U|120
6YBW|1|A|OMU|121
6YBW|1|A|G|122
*
6YBW|1|A|C|342
6YBW|1|A|A|343
6YBW|1|A|U|344
6YBW|1|A|U|345
6YBW|1|A|C|346
6YBW|1|A|G|347
6YBW|1|A|A|348

Current chains

Chain A

18S rRNA

Nearby chains

Chain B

40S ribosomal protein S11

Chain C

40S ribosomal protein S4, X isoform

Chain R

40S ribosomal protein S8