IL_6YDW_026

3D structure

PDB id

6YDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CACAUCC*GGCCAUG

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDW|1|AA|C|536
6YDW|1|AA|A|537
6YDW|1|AA|C|538
6YDW|1|AA|A|539
6YDW|1|AA|U|540
6YDW|1|AA|C|541
6YDW|1|AA|C|542
*
6YDW|1|AA|G|823
6YDW|1|AA|G|824
6YDW|1|AA|C|825
6YDW|1|AA|C|826
6YDW|1|AA|A|827
6YDW|1|AA|U|828
6YDW|1|AA|G|829

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AG

Mitochondrial ribosomal protein S7

Chain AI

Uncharacterized protein

Chain AY

tRNAMet

Chain Am

mS37