IL_6YDW_042

3D structure

PDB id

6YDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GUAG*CACAACC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDW|1|AA|G|867
6YDW|1|AA|U|868
6YDW|1|AA|A|869
6YDW|1|AA|G|870
*
6YDW|1|AA|C|897
6YDW|1|AA|A|898
6YDW|1|AA|C|899
6YDW|1|AA|A|900
6YDW|1|AA|A|901
6YDW|1|AA|C|902
6YDW|1|AA|C|903

Current chains

Chain AA

12S rRNA

Nearby chains

Chain Aj

mS34

Chain An

Aurora kinase A interacting protein 1

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BO

Uncharacterized protein

Chain BT

Mitochondrial ribosomal protein L19