IL_6YDW_067

3D structure

PDB id

6YDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CUCG*CACCAAG

Length

11 nucleotides

Bulged bases

6YDW|1|BA|C|665, 6YDW|1|BA|A|777

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDW|1|BA|C|663
6YDW|1|BA|U|664
6YDW|1|BA|C|665
6YDW|1|BA|G|666
*
6YDW|1|BA|C|773
6YDW|1|BA|A|774
6YDW|1|BA|C|775
6YDW|1|BA|C|776
6YDW|1|BA|A|777
6YDW|1|BA|A|778
6YDW|1|BA|G|779

Current chains

Chain BA

12S rRNA

Nearby chains

Chain BR

Uncharacterized protein

Chain Bw

39S ribosomal protein S30, mitochondrial