IL_6YDW_104

3D structure

PDB id

6YDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GAUAAUU*AAUUAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDW|1|BA|G|1507
6YDW|1|BA|A|1508
6YDW|1|BA|U|1509
6YDW|1|BA|A|1510
6YDW|1|BA|A|1511
6YDW|1|BA|U|1512
6YDW|1|BA|U|1513
*
6YDW|1|BA|A|1533
6YDW|1|BA|A|1534
6YDW|1|BA|U|1535
6YDW|1|BA|U|1536
6YDW|1|BA|A|1537
6YDW|1|BA|A|1538
6YDW|1|BA|C|1539

Current chains

Chain BA

12S rRNA

Nearby chains

Chain B9

Ribosomal protein

Chain BN

Uncharacterized protein

Chain Bx

Mitochondrial ribosomal protein S18A