IL_6YDW_113

3D structure

PDB id

6YDW (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtEFG1 and two tRNAMet (TI-POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

AUCA*UACGUGAU

Length

12 nucleotides

Bulged bases

6YDW|1|BA|A|1395, 6YDW|1|BA|C|1396, 6YDW|1|BA|G|1399, 6YDW|1|BA|A|1400

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YDW|1|BA|A|1333
6YDW|1|BA|U|1334
6YDW|1|BA|C|1335
6YDW|1|BA|A|1336
*
6YDW|1|BA|U|1394
6YDW|1|BA|A|1395
6YDW|1|BA|C|1396
6YDW|1|BA|G|1397
6YDW|1|BA|U|1398
6YDW|1|BA|G|1399
6YDW|1|BA|A|1400
6YDW|1|BA|U|1401

Current chains

Chain BA

12S rRNA

Nearby chains

Chain B5

Uncharacterized protein

Chain BE

ICT1

Chain BN

Uncharacterized protein