IL_6YEF_011

3D structure

PDB id

6YEF (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex with assigned rRNA modifications from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUACAAAG*UC

Length

11 nucleotides

Bulged bases

6YEF|1|A|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YEF|1|A|G|319
6YEF|1|A|U|320
6YEF|1|A|U|321
6YEF|1|A|A|322
6YEF|1|A|C|323
6YEF|1|A|A|324
6YEF|1|A|A|325
6YEF|1|A|A|326
6YEF|1|A|G|327
*
6YEF|1|A|U|399
6YEF|1|A|C|400

Current chains

Chain A

23S rRNA

Nearby chains