IL_6YEF_050

3D structure

PDB id

6YEF (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex with assigned rRNA modifications from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUAAAU*AUAGAAAAU

Length

15 nucleotides

Bulged bases

6YEF|1|A|A|1450

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YEF|1|A|A|1447
6YEF|1|A|U|1448
6YEF|1|A|A|1449
6YEF|1|A|A|1450
6YEF|1|A|A|1459
6YEF|1|A|U|1460
*
6YEF|1|A|A|1628
6YEF|1|A|U|1629
6YEF|1|A|A|1630
6YEF|1|A|G|1631
6YEF|1|A|A|1632
6YEF|1|A|A|1633
6YEF|1|A|A|1634
6YEF|1|A|A|1635
6YEF|1|A|U|1636

Current chains

Chain A

23S rRNA

Nearby chains