IL_6YEF_182

3D structure

PDB id

6YEF (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex with assigned rRNA modifications from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAGAG*UGGUC

Length

11 nucleotides

Bulged bases

6YEF|1|a|A|673

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YEF|1|a|G|669
6YEF|1|a|A|670
6YEF|1|a|A|671
6YEF|1|a|G|672
6YEF|1|a|A|673
6YEF|1|a|G|674
*
6YEF|1|a|U|748
6YEF|1|a|G|749
6YEF|1|a|G|750
6YEF|1|a|U|751
6YEF|1|a|C|752

Current chains

Chain a

16S rRNA

Nearby chains

Chain f

30S ribosomal protein S6

Chain o

30S ribosomal protein S15

Chain r

30S ribosomal protein S18