IL_6YLB_002
3D structure
- PDB id
- 6YLB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the SAM-SAH riboswitch with SAM
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.12 Å
Loop
- Sequence
- CAAC*GGCG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YLB_002 not in the Motif Atlas
- Geometric match to IL_6YML_002
- Geometric discrepancy: 0.0554
- The information below is about IL_6YML_002
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.1
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 44
Unit IDs
6YLB|1|A|C|12
6YLB|1|A|A|13
6YLB|1|A|A|14
6YLB|1|A|C|15
*
6YLB|1|A|G|24
6YLB|1|A|G|25
6YLB|1|A|C|26
6YLB|1|A|G|27
Current chains
- Chain A
- Chains: A,C,F,I,M,O
Nearby chains
- Chain B
- Chains: B,D,G,J,N,P
- Chain I
- Chains: A,C,F,I,M,O
- Chain J
- Chains: B,D,G,J,N,P
Coloring options: