IL_6YLG_044
3D structure
- PDB id
- 6YLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GACACCACAAAAG*CUGAAAAUGGAUGGCGC
- Length
- 30 nucleotides
- Bulged bases
- 6YLG|1|1|C|1199, 6YLG|1|1|A|1301, 6YLG|1|1|A|1302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YLG|1|1|G|1194
6YLG|1|1|A|1195
6YLG|1|1|C|1196
6YLG|1|1|A|1197
6YLG|1|1|C|1198
6YLG|1|1|C|1199
6YLG|1|1|A|1200
6YLG|1|1|C|1201
6YLG|1|1|A|1202
6YLG|1|1|A|1203
6YLG|1|1|A|1204
6YLG|1|1|A|1205
6YLG|1|1|G|1206
*
6YLG|1|1|C|1298
6YLG|1|1|U|1299
6YLG|1|1|G|1300
6YLG|1|1|A|1301
6YLG|1|1|A|1302
6YLG|1|1|A|1303
6YLG|1|1|A|1304
6YLG|1|1|U|1305
6YLG|1|1|G|1306
6YLG|1|1|G|1307
6YLG|1|1|A|1308
6YLG|1|1|U|1309
6YLG|1|1|G|1310
6YLG|1|1|G|1311
6YLG|1|1|C|1312
6YLG|1|1|G|1313
6YLG|1|1|C|1314
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain B
- 60S ribosomal protein L3
- Chain O
- 60S ribosomal protein L16-A
- Chain S
- 60S ribosomal protein L20-A
- Chain W
- Ribosome assembly factor MRT4
- Chain b
- Nucleolar GTP-binding protein 1
- Chain f
- 60S ribosomal protein L33-A
- Chain r
- Ribosome biogenesis protein NSA2
- Chain s
- Nuclear GTP-binding protein NUG1
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