IL_6YLG_129
3D structure
- PDB id
- 6YLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AUUAGAGGUUCCGG*UUGACCUAU
- Length
- 23 nucleotides
- Bulged bases
- 6YLG|1|1|U|1015, 6YLG|1|1|C|1016, 6YLG|1|1|C|1017
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YLG|1|1|A|1006
6YLG|1|1|U|1007
6YLG|1|1|U|1008
6YLG|1|1|A|1009
6YLG|1|1|G|1010
6YLG|1|1|A|1011
6YLG|1|1|G|1012
6YLG|1|1|G|1013
6YLG|1|1|U|1014
6YLG|1|1|U|1015
6YLG|1|1|C|1016
6YLG|1|1|C|1017
6YLG|1|1|G|1018
6YLG|1|1|G|1019
*
6YLG|1|1|U|1033
6YLG|1|1|U|1034
6YLG|1|1|G|1035
6YLG|1|1|A|1036
6YLG|1|1|C|1037
6YLG|1|1|C|1038
6YLG|1|1|U|1039
6YLG|1|1|A|1040
6YLG|1|1|U|1041
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 5
- rRNA-processing protein CGR1
- Chain K
- Pre-rRNA-processing protein IPI1
- Chain m
- Nucleolar GTP-binding protein 2
- Chain r
- Ribosome biogenesis protein NSA2
- Chain t
- Protein SDA1
- Chain x
- Ribosome assembly protein 4
Coloring options: