IL_6YLH_010
3D structure
- PDB id
- 6YLH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rix1-Rea1 pre-60S particle - full composite structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUU*AGUGCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YLH_010 not in the Motif Atlas
- Geometric match to IL_8P9A_467
- Geometric discrepancy: 0.3237
- The information below is about IL_8P9A_467
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07469.2
- Basepair signature
- cWW-tSH-cWW-cSH-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
6YLH|1|1|C|175
6YLH|1|1|G|176
6YLH|1|1|U|177
6YLH|1|1|U|178
*
6YLH|1|1|A|238
6YLH|1|1|G|239
6YLH|1|1|U|240
6YLH|1|1|G|241
6YLH|1|1|C|242
6YLH|1|1|G|243
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain L
- 60S ribosomal protein L13-A
- Chain h
- 60S ribosomal protein L35-A
- Chain j
- 60S ribosomal protein L37-A
Coloring options: