IL_6YLH_017

3D structure

PDB id

6YLH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rix1-Rea1 pre-60S particle - full composite structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAGAG*CAUAAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YLH|1|1|C|435
6YLH|1|1|A|436
6YLH|1|1|G|437
6YLH|1|1|A|438
6YLH|1|1|G|495
*
6YLH|1|1|C|618
6YLH|1|1|A|619
6YLH|1|1|U|620
6YLH|1|1|A|621
6YLH|1|1|A|622
6YLH|1|1|U|623
6YLH|1|1|G|624

Current chains

Chain 1

25S rRNA

Nearby chains

Chain E

60S ribosomal protein L6-A

Chain P

60S ribosomal protein L17-A

Chain c

Ribosome biogenesis protein ALB1

Chain e

60S ribosomal protein L32

Chain f

60S ribosomal protein L33-A