IL_6YLH_075

3D structure

PDB id

6YLH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rix1-Rea1 pre-60S particle - full composite structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCCCAG*CGGC

Length

10 nucleotides

Bulged bases

6YLH|1|1|C|2197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YLH|1|1|G|2194
6YLH|1|1|C|2195
6YLH|1|1|C|2196
6YLH|1|1|C|2197
6YLH|1|1|A|2198
6YLH|1|1|G|2199
*
6YLH|1|1|C|2245
6YLH|1|1|G|2246
6YLH|1|1|G|2247
6YLH|1|1|C|2248

Current chains

Chain 1

25S rRNA

Nearby chains

Chain A

60S ribosomal protein L2-A

Chain K

Pre-rRNA-processing protein IPI1

Chain m

Nucleolar GTP-binding protein 2

Chain t

Protein SDA1