IL_6YLH_092

3D structure

PDB id

6YLH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rix1-Rea1 pre-60S particle - full composite structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCUCU*AACGUGAGC

Length

14 nucleotides

Bulged bases

6YLH|1|1|G|2943, 6YLH|1|1|A|2946

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YLH|1|1|G|2878
6YLH|1|1|C|2879
6YLH|1|1|U|2880
6YLH|1|1|C|2881
6YLH|1|1|U|2882
*
6YLH|1|1|A|2940
6YLH|1|1|A|2941
6YLH|1|1|C|2942
6YLH|1|1|G|2943
6YLH|1|1|U|2944
6YLH|1|1|G|2945
6YLH|1|1|A|2946
6YLH|1|1|G|2947
6YLH|1|1|C|2948

Current chains

Chain 1

25S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain V

60S ribosomal protein L23-A

Chain b

Nucleolar GTP-binding protein 1