IL_6YLX_107

3D structure

PDB id

6YLX (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-60S State NE1 (TAP-Flag-Nop53)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGG*CUUUGUA

Length

10 nucleotides

Bulged bases

6YLX|1|1|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YLX|1|1|U|169
6YLX|1|1|G|170
6YLX|1|1|G|171
*
6YLX|1|1|C|247
6YLX|1|1|U|248
6YLX|1|1|U|249
6YLX|1|1|U|250
6YLX|1|1|G|251
6YLX|1|1|U|252
6YLX|1|1|A|253

Current chains

Chain 1

25S rRNA

Nearby chains

Chain G

60S ribosomal protein L8-A

Chain L

60S ribosomal protein L13-A

Chain h

60S ribosomal protein L35-A