IL_6YS5_012

3D structure

PDB id

6YS5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Acinetobacter baumannii ribosome-amikacin complex - 30S subunit head

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACUUGC*GAACUUU

Length

13 nucleotides

Bulged bases

6YS5|1|3|U|1123

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YS5|1|3|A|1120
6YS5|1|3|C|1121
6YS5|1|3|U|1122
6YS5|1|3|U|1123
6YS5|1|3|G|1124
6YS5|1|3|C|1125
*
6YS5|1|3|G|1141
6YS5|1|3|A|1142
6YS5|1|3|A|1143
6YS5|1|3|C|1144
6YS5|1|3|U|1145
6YS5|1|3|U|1146
6YS5|1|3|U|1147

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain j

30S ribosomal protein S9

Chain k

30S ribosomal protein S10