IL_6YSI_034
3D structure
- PDB id
- 6YSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UUAAGUGGGAAAC*GGAAGAUGUAACGGGGCUAAAA
- Length
- 35 nucleotides
- Bulged bases
- 6YSI|1|1|A|1117, 6YSI|1|1|U|1120, 6YSI|1|1|A|1132
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6YSI|1|1|U|1008
6YSI|1|1|U|1009
6YSI|1|1|A|1010
6YSI|1|1|A|1011
6YSI|1|1|G|1012
6YSI|1|1|U|1013
6YSI|1|1|G|1014
6YSI|1|1|G|1015
6YSI|1|1|G|1016
6YSI|1|1|A|1017
6YSI|1|1|A|1018
6YSI|1|1|A|1019
6YSI|1|1|C|1020
*
6YSI|1|1|G|1114
6YSI|1|1|G|1115
6YSI|1|1|A|1116
6YSI|1|1|A|1117
6YSI|1|1|G|1118
6YSI|1|1|A|1119
6YSI|1|1|U|1120
6YSI|1|1|G|1121
6YSI|1|1|U|1122
6YSI|1|1|A|1123
6YSI|1|1|A|1124
6YSI|1|1|C|1125
6YSI|1|1|G|1126
6YSI|1|1|G|1127
6YSI|1|1|G|1128
6YSI|1|1|G|1129
6YSI|1|1|C|1130
6YSI|1|1|U|1131
6YSI|1|1|A|1132
6YSI|1|1|A|1133
6YSI|1|1|A|1134
6YSI|1|1|A|1135
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain F
- 50S ribosomal protein L13
- Chain I
- 50S ribosomal protein L16
- Chain b
- 50S ribosomal protein L36
Coloring options: